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1

Generalized Potential Energy Finite Elements for Modeling Molecular Nanostructures

Chatzieleftheriou, Stavros, Adendorff, Matthew R., Lagaros, Nikos D.

Journal:

Journal of Chemical Information and Modeling

Year:

2016

Language:

english

File:

PDF, 9.17 MB

english, 2016

2

Biophysical Modeling of Nucleic Acid Nanostructure Solution Shape and Stability

Kim, Do-Nyun, Adendorff, Matthew Ralph, Pan, Keyao, Bathe, Mark

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 33 KB

english, 2013

3

Lattice-free prediction of three-dimensional structure of programmed DNA assemblies

Pan, Keyao, Kim, Do-Nyun, Zhang, Fei, Adendorff, Matthew R., Yan, Hao, Bathe, Mark

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 1.67 MB

english, 2014

4

Antiplasmodial activity: The first proof of inhibition of heme crystallization by marine isonitriles

Young, Ryan M., Adendorff, Matthew R., Wright, Anthony D., Davies-Coleman, Michael T.

Journal:

European Journal of Medicinal Chemistry

Year:

2015

Language:

english

File:

PDF, 1.85 MB

english, 2015

5

Molecular Dynamics Investigation of Immobile DNA Four-Way Junctions

Adendorff, Matthew R., Bathe, Mark

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 42 KB

english, 2015

6

Computing Nonequilibrium Conformational Dynamics of Structured Nucleic Acid Assemblies

Sedeh, Reza Sharifi, Pan, Keyao, Adendorff, Matthew Ralph, Hallatschek, Oskar, Bathe, Klaus-Jürgen, Bathe, Mark

Journal:

Journal of Chemical Theory and Computation

Year:

2015

Language:

english

File:

PDF, 4.20 MB

english, 2015

7

The Malarial Drug Target Plasmodium falciparum 1-Deoxy-D-Xylulose-5- Phosphate Reductoisomerase (PfDXR): Development of a 3-D Model for Identification of Novel, Structural and Functional Features and for Inhibitor Screening (Supplementary Information)

Goble, Jessica, Adendorff, Matthew, de Beer, Tjaart, Stephens, Linda, Blatch, Gregory

Journal:

Protein & Peptide Letters

Year:

2010

Language:

english

File:

PDF, 855 KB

english, 2010

8

Brownian Dynamics of Folded DNA and Protein Assemblies

Sedeh, Reza, Pan, Keyao, Adendorff, Matthew, Hallatschek, Oskar, Bathe, Klaus-Jürgen, Bathe, Mark

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 40 KB

english, 2015

9

Lattice-Free 3D Structure-Prediction of Programmed DNA Assemblies

Pan, Keyao, Kim, Do-Nyun, Zhang, Fei, Adendorff, Matthew, Yan, Hao, Bathe, Mark

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 40 KB

english, 2015

10

Base-Pair Level Analysis of DNA Four-Way Junction Structure and Dynamics

Adendorff, Matthew R., Bathe, Mark

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 40 KB

english, 2016

11

Mechanical Modulation of Enzyme Activity by Rationally Designed DNA Tweezers: From the Ensemble to the Single-Molecule Level

Dhakal, Soma, Liu, Minghui, Adendorff, Matthew R., Bathe, Mark, Yan, Hao, Walter, Nils G.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 59 KB

english, 2015